Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807602.1_cds_XP_016494895.1_9267
CDS Infomation

[gene=LOC107814078] [db_xref=GeneID:107814078] [protein=T-complex protein 1 subunit beta-like] [protein_id=XP_016494895.1] [location=join(10441..10446,10526..10582,11099..11164,11259..11370,12114..12242,13148..13219,13440..13555,15362..15438,16417..16902,17289..17604,17823..17966)] [gbkey=CDS]
Sequence

ATGGCGATTGACAGGATTCTTAAAGATGAAGCTACAGAAGAAAAGGGAGAGCGAGCTAGA
ATGGCATCCTTTGTGGGGGCTATGGCAATTGCCGACTTGGTTAAGACAACATTAGGACCT
AAGGGAATGGATAAAATTTTACAATCAACCGGCAGAGGTCATAGTGTTACAGTTACAAAT
GATGGCGCCACAATTTTGAAGTCCCTCCGTATTGACAATCCTGCTGCCAAGGTCCTGGTT
GACATCTCTAAAGTACAAGATGATGAAGTTGGTGATGGGACAACGTCTGTAGTTGTTTTG
GCTGGAGAACTTTTAAGGGAGGGAGAGAAGCTGGTTAATTCGAAAATTCATCCAATGACA
ATTATTTCAGGTTATCGTATGGCAGCTGAATGTGCACGCAATGTGTTGCTGCAGAAGGTT
GTTGATAATAAACAGGATGCAGAGAAGTTTAGGTCGGACTTGATGAATATTGCGATGACT
ACTTTGAGCTCGAAAATCTTGTCTCAGGACAAGGAGCATTTTGCAAAACTGTCTGTTGAT
GCAGTTATGAGGTTAAAGGGCAGCACCAATCTAGAGGCAATCCAAATTATTAAGAAGCCT
GGAGGTTCTCTGAAGGATTCATTTTTAGATGAAGGGTTTATTTTGGATAAAAAGATTGGG
GTTGGCCAACCAAAACGTATTGAAAATGCTAAGATCTTGGTGTCCAACACTGCAATGGAT
ACTGATAAAGTTAAAATCTATGGAGCACGTGTCCGAGTTGACTCAATGGCCAAGGTTGCT
GAACTAGAAGCTGCTGAAAAAGATAAAATGAGGGAGAAGGTGCAAAAGATCATCTCTCAT
GGAATAAACTGCTTTGTTAACAGACAGCTGATTTACAATTTCCCAGAGGAACTATTTGCC
GATGCAGGGATACTTGCAATCGAGCATGCTGATTTTGATGGTATTGAGCGCCTGGCTTTA
GTTACTGGTGGAGAGATTGCATCTACCTTTGATAACCCAGAGTCTGTCAAGCTTGGCCAC
TGCAAACTCATTGAAGAAATAATGATTGGTGAGGATAAGTTGATCCACTTTTCTGGGGTT
GAAATGGGTCAGGCGTGTACGATTGTCTTGAGAGGTGCAAGCCCTCATGTACTGGATGAA
GCTGAAAGGTCTTTGCATGATGCCTTGTGTGTACTGTCTCAGACAGTAAATGACAGCAGA
GTTCTACTTGTAGGTGGATGGCCTGAGATGGTGATGGCGAAGGCAGTGGATGAACTGGCT
AAAAAGACACCTGGTAAAAGATCTCACGCAATTGAGGCTTTTTCCCGGGCACTTTTGGCA
ATTCCGACCATCATTGCTGACAATGCTGGTCTGGACAGTGCTGAGCTGGTCGCTCAGCTT
CGTGCAGAGCATCACAAGGAGGAAAGCAATGCAGGGATAGATGTCATCACTGGACATGTT
GGAGATATGGCAGAGTTAGGAATTTCAGAGGCATTCAAAGTCAAACAGGCTGTGTTGCTC
TCTGCAACCGAGGCTGCTGAGATGATCCTACGAGTTGATGAAATCATCACATGTGCCCCA
CGGAGGAGGGAAGGAATTTAA

Peptide Sequence

PEP ID

XP_016494895.1
PEP Infomation

PREDICTED: T-complex protein 1 subunit beta-like [Nicotiana tabacum]
Sequence

MAIDRILKDEATEEKGERARMASFVGAMAIADLVKTTLGPKGMDKILQSTGRGHSVTVTN
DGATILKSLRIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREGEKLVNSKIHPMT
IISGYRMAAECARNVLLQKVVDNKQDAEKFRSDLMNIAMTTLSSKILSQDKEHFAKLSVD
AVMRLKGSTNLEAIQIIKKPGGSLKDSFLDEGFILDKKIGVGQPKRIENAKILVSNTAMD
TDKVKIYGARVRVDSMAKVAELEAAEKDKMREKVQKIISHGINCFVNRQLIYNFPEELFA
DAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGV
EMGQACTIVLRGASPHVLDEAERSLHDALCVLSQTVNDSRVLLVGGWPEMVMAKAVDELA
KKTPGKRSHAIEAFSRALLAIPTIIADNAGLDSAELVAQLRAEHHKEESNAGIDVITGHV
GDMAELGISEAFKVKQAVLLSATEAAEMILRVDEIITCAPRRREGI

Transcript Sequence

Gene sequence data has not been registered.